PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV27626.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family AP2
Protein Properties Length: 404aa    MW: 45234.9 Da    PI: 8.2067
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV27626.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.55.8e-17147196155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  KZV27626.1 147 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHTAARAYDRAAIKFRG 196
                 78*******************......55************************997 PP

2AP243.67.4e-14239286152
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkk 52 
                 s+y+GV+ +k  grW+A+  ++   g +k+++lg f+t+ eAa+a+++a+ k
  KZV27626.1 239 SKYRGVTLHK-CGRWEARMGEFL--G-KKYVYLGLFDTEIEAARAYDRAAIK 286
                 89********.7******77742..2.5**********99*********987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.75E-15147204IPR016177DNA-binding domain
PfamPF008475.7E-9147196IPR001471AP2/ERF domain
SMARTSM003801.9E-30148210IPR001471AP2/ERF domain
PROSITE profilePS5103217.069148204IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.8E-17148203IPR001471AP2/ERF domain
CDDcd000182.52E-22148203No hitNo description
CDDcd000181.24E-22239299No hitNo description
PfamPF008471.4E-9239286IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-16239297IPR016177DNA-binding domain
SMARTSM003804.1E-30240303IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.2E-16240297IPR001471AP2/ERF domain
PROSITE profilePS5103215.712240297IPR001471AP2/ERF domain
PRINTSPR003671.6E-5241252IPR001471AP2/ERF domain
PRINTSPR003671.6E-5279299IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    Send to blast
MWDLNDSPEE RREDESDEKG KRVGSVSNSS SSAVVMEEVS DEDVAERNTS KRRGSRIFGF  60
SVDNNEYDET GHISPESEVP VTRQFFPADE SEMGCTGAPP DFPRAHWFGV NFRQPEPGGG  120
ATASGKETAE VTQPFKKSRR GPRSRSSQYR GVTFYRRTGR WESHIWDCGK QVYLGGFDTA  180
HTAARAYDRA AIKFRGVEAD INFCLNDYAD DLKQMKNLTK EEFVHVLRRQ SSGYPRGSSK  240
YRGVTLHKCG RWEARMGEFL GKKYVYLGLF DTEIEAARAY DRAAIKSNGK DAITNFDPVS  300
YDDELQVAGR SMNDASDHNL DLTLGNSSAP KQNSSNKSQV SWRCQESWPK IHYKLPLVVS  360
GRNIGGTRLT DRQGQTHLFG NAAASSGFQQ AQKITGIHPL TRPN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011097248.11e-141PREDICTED: floral homeotic protein APETALA 2-like isoform X1
SwissprotP479271e-125AP2_ARATH; Floral homeotic protein APETALA 2
TrEMBLC1KBJ21e-140C1KBJ2_VITVI; Transcription factor APETALA2
TrEMBLF6H4H71e-140F6H4H7_VITVI; Putative uncharacterized protein
STRINGVIT_07s0031g00220.t011e-140(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA20192365
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36920.21e-114AP2 family protein